Marine data management and data quality control - 1

Section outline

• Select section Introduction

  Introduction

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  Istituto di Scienze Marine del CNR (CNR-ISMAR), Arsenale Tesa 104, Castello 2737/F - 30122 Venezia

  9 December 2024, from 14:00 to 18:00

  10 December 2024, from 09:00 to 18:00

  11 December 2024, from 09:00 to 18:00

  12 December 2024, from 09:00 to 16:30

  30 (hybrid)

   Alessandra Giorgetti, Simona Simoncelli, Mauro Caccavale, Antonio Novellino, Elena Partescano, Mario Locati, Reiner Schiltzer
  
  

  

  This course aims to provide a comprehensive introduction to marine data management and validation, including the guiding principles of open science and the European data infrastructures that support it. This course has been developed by and for marine data managers and researchers responsible for the collection and good management of marine data. It covers various general aspects related to marine data management and data life cycle, including metadata, quality control, data policy, data sharing and publication, data management plans. By the end of this course, participants will be able to undertake the core tasks required to process and curate marine data and advise researchers on the importance of metadata and responsible data sharing.

  Participants will get with a solid understanding of the fundamental concepts, best practices and principles of data management and quality control. Insights from previous experiences and case studies will allow participants to deepen the knowledge on the national and EU landscape of marine data infrastructures. Practical exercises will enable RI staff to acquire the basic skills to be applied effectively in their specific context.
• Select section VIDEORECORDING

  VIDEORECORDING

  • Select activity WP5 Marine data management and data quality control RI Day1 09122024

    

    WP5 Marine data management and data quality control RI Day1 09122024 URL
  • Select activity WP5 Marine data management and data quality control RI Day2 10122024

    

    WP5 Marine data management and data quality control RI Day2 10122024 URL
  • Select activity WP5 Marine data management and data quality control RI Day3 11122024

    

    WP5 Marine data management and data quality control RI Day3 11122024 URL
  • Select activity WP5 Marine data management and data quality control RI Day4 12122024

    

    WP5 Marine data management and data quality control RI Day4 12122024 URL
• Select section Syllabus

  Syllabus

  1. Data life cycle, data value chain, BDI, FAIRness (2 hour).
  2. Open Science, European and Italian landscape for data management, marine data infrastructures and ITINERIS federated approach (2 hour).
  3. Research data management, Identifiers and metadata (3 hours).
  4. Metadata standards and interoperability: examples and tools (4 hours).
  5. Data processing, Quality control, Data analysis and visualisation. Hands-on session on Ocean Data View (5 hours).
  6. Operational services and EU data platforms. Hands-on session on ERDDAP (4 hours).
  7. The ITINERIS marine hub and IT-IOOS: how it works and how to contribute (2 hours).
     
     

  • Select activity Data Management & Data Quality Control - Course Overview

    

    Data Management & Data Quality Control - Course Overview File PDF
• Select section Data life cycle, data value chain, BDI, FAIRness

  Data life cycle, data value chain, BDI, FAIRness

  Data life cycle, data value chain, BDI, FAIRness

  • Select activity Marine Datascape - Simoncelli

    

    Marine Datascape - Simoncelli File PDF
• Select section Open Science, European and Italian landscape for data management, marine data infrastructures and ITINERIS federated approach

  Open Science, European and Italian landscape for data management, marine data infrastructures and ITINERIS federated approach

  Open Science, European and Italian landscape for data management, marine data infrastructures and ITINERIS federated approach 

  • Select activity Data Management at a European context - Giorgetti

    

    Data Management at a European context - Giorgetti File PDF
• Select section Research data management, Identifiers and metadata

  Research data management, Identifiers and metadata

  Research data management, Identifiers and metadata

  • Select activity Research Data Management - Locati

    

    Research Data Management - Locati File PDF
  • Select activity Management of Identifiers and Metadata - Locati

    

    Management of Identifiers and Metadata - Locati File PDF
• Select section Metadata standards and interoperability: examples and tools

  Metadata standards and interoperability: examples and tools

  - Dealing with data and metadata:

  • Metadata in SeaDataNet/EMODnet directories.
  • Common Data Inedx (CDI): SeaDataNet metadata content standard.
  • Metadata format for reporting on cruises (Cruise Summary Report- CSR), dataset (European Directory of Marine Environmental Data sets EDMED), projects (EDMERP) and organisations (EDMO).
  • SeaDataNet NVS controlled vocabularies (for metadata and data).
    Data submission in the EMODnet Ingestion Workflow (phases for data submitters, metadata, and NODC processing).

  - Software for ocean data and metadata management.

  - SeaDataNet Metadata formatting tools:

  • MIKADO: for editing and generating XML metadata entries for the for the SeaDataNet directories EDMED, CSR, EDMERP and CDI.

  - SeaDataNet Data formatting tools:

  • NEMO: for conversion of any ASCII format to all SeaDataNet data formats (ODV ASCII, NetCDF (CF) and MedAtlas).
  • OCTOPUS: a multi-format splitter and converter tool to to convert files in a given SeaDataNet format to another SeaDataNet format (e.g. ODV to NetCDF, MedAtlas to NetCDF, MedAtlas to ODV).

  SeaDataNet Access: https://www.seadatanet.org/Data-Access
  MIKADO download: https://www.seadatanet.org/Software/MIKADO/Download-MIKADO
  NEMO download: https://www.seadatanet.org/Software/NEMO

  • Select activity Dealing with Data and Metadata - Partescano

    

    Dealing with Data and Metadata - Partescano File PDF
  • Select activity Software for ocean data and metadata management - Partescano

    

    Software for ocean data and metadata management - Partescano File PDF
• Select section Data processing, Quality control, Data analysis and visualisation. Hands-on session on Ocean Data View

  Data processing, Quality control, Data analysis and visualisation. Hands-on session on Ocean Data View

  Data processing, Quality control, Data analysis and visualisation. Hands-on session on Ocean Data View 

  • Select activity Data Quality Control - Simoncelli

    

    Data Quality Control - Simoncelli File PDF
  • Select activity Ocean Data View (ODV) - Workshop requirements

    

    Ocean Data View (ODV) - Workshop requirements File PDF
  • Select activity Data visualization and anlysis with Ocean Data View (ODV) - Schlitzer

    

    Data visualization and anlysis with Ocean Data View (ODV) - Schlitzer File PDF
  • Select activity OdV Hands On-Outline - Schlitzer

    

    OdV Hands On-Outline - Schlitzer File PDF
  • Select activity ODV Quality Flag Sets - Schlitzer

    

    ODV Quality Flag Sets - Schlitzer File PDF
  • Select activity The European operational oceanography data exchange - Novellino

    

    The European operational oceanography data exchange - Novellino File PDF
• Select section Operational services and EU data platforms. Hands-on session on ERDDAP

  Operational services and EU data platforms. Hands-on session on ERDDAP

  Operational services and EU data platforms. Hands-on session on ERDDAP

  • Select activity ERDDAP - Novellino

    

    ERDDAP - Novellino File PDF
• Select section The ITINERIS marine hub and IT-IOOS: how it works and how to contribute

  The ITINERIS marine hub and IT-IOOS: how it works and how to contribute

  • The philosophy and the technical aspects behind the marine data portal.
  • The distributed hardware infrastructure and topology.
  • The individual data managements server.
  • The end points federation.
  • The marine portal back-end organization: metadata and data harmonization, monitoring, statistics, etc.
  • The marine portal front-end: graphics interface, layers, datasets, etc.

  • Select activity IT-IOOS - Caccavale

    

    IT-IOOS - Caccavale File PDF